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On this page it is only possible to search for blast annotations and/or for cluster IDs. For sequence similarity (BLAST) go to our Collembase BLAST page.

Database information

The ESTs were processed using the PartiGene pipeline. Sequences were blasted against several Genbank databases. Results were stored in a PostgreSQL database.

Content

  • Folsomia candida

    • - Normalized: 7329 ESTs
    - Phenantrene (SSH): 705 ESTs
    - Cadmium (SSH): 808 ESTs

  • Orchesella cincta

    • - 1259 ESTs
    - 730 clusters

  • Onychiurus arcticus

    • - 16379 ESTs
    - 9541 clusters

Select organism


Retrieve a specific cluster
Enter a PartiGene-style cluster ID (e.g. Fcc00451 / Fcc00101)


Search by BLAST annotation
Library specific
Text      Minimum e value
To view all clusters for an organism just leave the text box blank




Search for a sequence ID
Enter an EST ID (e.g Fc_cad_02B02)

Gene Ontology

Search for Gene Ontology
Select organism
Enter an G.O. ID or term ID (e.g. GO:0000001 / mitochondrion inheritance)

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