collembase


Publications Department of Animal Ecology, Vrije Universiteit Amsterdam

1) Collembase: a repository for springtail genomics and soil quality assessment: BMC Genomics 2007, 8:341

  • Supplementary Table 1: Primers used to test the normalization efficiency.
  • Supplementary Figure 1: Sequence length (bp) distribution of different contigs in Collembase.


    2) Phylogenetic study

  • Amino acid translated ribosomal protein gene alignment will be made available after acceptance of publication


    Other publications regarding EST data in Collembase

    1) Surviving extreme polar winters by desiccation: clues from Arctic springtail (Onychiurus arcticus) EST libraries: BMC Genomics 2007, 8:475


    2) Ellers J, Mariën J, Driessen G, van Straalen NM: Temperature-induced gene expression associated with different thermal reaction norms for growth rate. Journal of Experimental Zoology Part B: Molecular and Developmental Evolution 2008, 310B: 137-147.


    3) Roelofs D, Marien J, van Straalen NM: Differential gene expression profiles associated with heavy metal tolerance in the soil insect Orchesella cincta. Insect Biochemistry and Molecular Biology 2007, 37(4):287-295.