collembase

Search options

On this page it is only possible to search for blast annotations and/or for cluster IDs. For sequence similarity (BLAST) go to our Collembase BLAST page.

Database information

The ESTs were processed using the PartiGene pipeline. Sequences were blasted against several Genbank databases. Results were stored in a PostgreSQL database.

Content

  • Folsomia candida

  • - Normalized: 7329 ESTs
    - Phenantrene (SSH): 705 ESTs
    - Cadmium (SSH): 808 ESTs

  • Orchesella cincta

  • - 0 ESTs

  • Onychiurus arcticus

  • - 0 ESTs

Search Collembase


Retrieve Oligos
Enter a PartiGene-style cluster name ID (e.g. Fcc00451 / Fcc00101)